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The crystal structure of the strigolactone-induced AtD14-D3-ASK1 complex
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 EVAPORATION 291 16% PEG 3350, 16mM BICINE pH 9.0, 20mM HEPES pH 7.5, 4.4% w/v Polyacrylic Acid 5100 Sodium salt, 10mM Praseodymium (III) acetate hydrate, 100 mM NDSB-256
Crystal Properties Matthews coefficient Solvent content 3.31 62.85
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 106.397 α = 90 b = 172.979 β = 90 c = 186.845 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2014-09-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRF BEAMLINE BL17U 0.9792 SSRF BL17U
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.3 50 99.9 12.6 19.82 49674
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.3 3.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 3.3 49.07 49674 2669 99.46 0.24969 0.24623 0.2558 0.31585 0.3172 RANDOM 89.173
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.01 -0.02 0.03
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.93 r_dihedral_angle_3_deg 22.179 r_dihedral_angle_4_deg 17.013 r_long_range_B_refined 13.773 r_long_range_B_other 13.772 r_dihedral_angle_1_deg 10.662 r_mcangle_other 9.032 r_mcangle_it 9.03 r_scangle_other 8.264 r_mcbond_it 5.502
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.93 r_dihedral_angle_3_deg 22.179 r_dihedral_angle_4_deg 17.013 r_long_range_B_refined 13.773 r_long_range_B_other 13.772 r_dihedral_angle_1_deg 10.662 r_mcangle_other 9.032 r_mcangle_it 9.03 r_scangle_other 8.264 r_mcbond_it 5.502 r_mcbond_other 5.494 r_scbond_it 4.868 r_scbond_other 4.867 r_angle_refined_deg 1.781 r_angle_other_deg 1.151 r_chiral_restr 0.149 r_bond_refined_d 0.011 r_gen_planes_refined 0.007 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 15638 Nucleic Acid Atoms Solvent Atoms 24 Heterogen Atoms 14
Software Software Software Name Purpose REFMAC refinement HKL-2000 data processing HKL-2000 data scaling PHENIX phasing