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Staphylococcus aureus FtsZ-GDP R29A mutant in R state
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 5H5G
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8.4 293 100mM Tris, 45% w/v PEP629, 300mM KCl
Crystal Properties Matthews coefficient Solvent content 2.36 47.81
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 64.757 α = 90 b = 59.279 β = 109.13 c = 81.77 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX300HE 2016-04-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL44XU 0.900 SPring-8 BL44XU
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 50 99.2 0.064 0.075 0.039 8 3.8 22985
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.93 99.5 0.503 0.843 3.7 1120
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 5H5G 1.9 42.57 21847 1138 98.85 0.1906 0.1887 0.1966 0.2232 0.235 RANDOM 42.799
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.02 -0.02 0.03
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.366 r_dihedral_angle_4_deg 15.346 r_dihedral_angle_3_deg 14.448 r_dihedral_angle_1_deg 6.077 r_mcangle_it 4.788 r_mcbond_it 3.431 r_mcbond_other 3.415 r_angle_refined_deg 1.695 r_angle_other_deg 0.993 r_chiral_restr 0.1
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.366 r_dihedral_angle_4_deg 15.346 r_dihedral_angle_3_deg 14.448 r_dihedral_angle_1_deg 6.077 r_mcangle_it 4.788 r_mcbond_it 3.431 r_mcbond_other 3.415 r_angle_refined_deg 1.695 r_angle_other_deg 0.993 r_chiral_restr 0.1 r_bond_refined_d 0.014 r_gen_planes_refined 0.006 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2195 Nucleic Acid Atoms Solvent Atoms 124 Heterogen Atoms 28
Software Software Software Name Purpose HKL-2000 data scaling REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data reduction PHASER phasing HKL data scaling