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Zika Virus NS2B-NS3 protease
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 MICROBATCH 6.5 293 0.1 M bis-tris, 0.05 M calcium chloride dihydrate, 30% polyethylene glycol monomethyl ether 550
Crystal Properties Matthews coefficient Solvent content 2.01 38.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.206 α = 90 b = 55.206 β = 90 c = 250.135 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS3 6M 2016-06-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRF BEAMLINE BL18U1 0.97853 SSRF BL18U1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.6 50 99.9 17 11.1 12503
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.6 39.04 12103 672 99.9 0.22703 0.22448 0.2266 0.27268 0.2455 RANDOM 104.798
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.55 0.55 -1.1
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.637 r_dihedral_angle_4_deg 24.914 r_dihedral_angle_3_deg 19.961 r_long_range_B_refined 10.603 r_long_range_B_other 10.602 r_dihedral_angle_1_deg 7.455 r_scangle_other 5.754 r_mcangle_it 5.406 r_mcangle_other 5.404 r_scbond_it 3.589
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.637 r_dihedral_angle_4_deg 24.914 r_dihedral_angle_3_deg 19.961 r_long_range_B_refined 10.603 r_long_range_B_other 10.602 r_dihedral_angle_1_deg 7.455 r_scangle_other 5.754 r_mcangle_it 5.406 r_mcangle_other 5.404 r_scbond_it 3.589 r_scbond_other 3.587 r_mcbond_other 3.449 r_mcbond_it 3.447 r_angle_refined_deg 2.002 r_angle_other_deg 1.117 r_chiral_restr 0.101 r_bond_refined_d 0.019 r_gen_planes_refined 0.008 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2459 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling PHASER phasing