5FWZ

Fasciola hepatica calcium binding protein FhCaBP2: Structure of the dynein light chain-like domain. P41212 mercury derivative.

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1		8.5		10 MM TRIS-HCL PH 8.5, 50 MM SODIUM CHLORIDE 20 % (W/V) PEG 3350, 0.2 M SODIUM TARTRATE

Crystal Properties
Matthews coefficient	Solvent content
3.2	61.3

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 59.88	α = 90
b = 59.88	β = 90
c = 81.32	γ = 90

Symmetry
Space Group	P 41 21 2

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS 6M	ELLIPTICALLY BENT VERTICAL AND HORIZONTAL FOCUSSING MIRRORS	2015-04-30	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	ALBA BEAMLINE XALOC		ALBA	XALOC

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.3	23	99.9	0.12	12	9.6		7026			30.9

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.3	2.42	100		0.47	4.5	9.7

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work	R-Free	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	SAD	THROUGHOUT	NONE	2.3	22.83	6289	702	99.81	0.1965	0.19132	0.24051	RANDOM	36.662

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
1.12			1.12		-2.23

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	33.922
r_dihedral_angle_3_deg	17.164
r_dihedral_angle_4_deg	15.187
r_dihedral_angle_1_deg	6.042
r_scangle_it	5.003
r_mcangle_it	4.531
r_scbond_it	2.988
r_mcbond_other	2.67
r_mcbond_it	2.668
r_angle_refined_deg	1.469
r_angle_other_deg	0.948
r_symmetry_hbond_refined	0.258
r_nbd_refined	0.209
r_symmetry_vdw_refined	0.203
r_symmetry_vdw_other	0.182
r_nbtor_refined	0.177
r_xyhbond_nbd_refined	0.176
r_nbd_other	0.149
r_xyhbond_nbd_other	0.094
r_chiral_restr	0.084
r_nbtor_other	0.079
r_bond_refined_d	0.012
r_gen_planes_refined	0.007
r_bond_other_d	0.002
r_gen_planes_other	0.001
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	799
Nucleic Acid Atoms
Solvent Atoms	57
Heterogen Atoms	3

Software

Software
Software Name	Purpose
REFMAC	refinement
MOSFLM	data reduction
SCALA	data scaling
autoSHARP	phasing