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PH domain of ASAP1 in complex with diC4-PtdIns(4,5)P2
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 294 0.1M HEPES, pH 7.5, 15% PEG 3350
Crystal Properties Matthews coefficient Solvent content 1.56 20.96
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 37.543 α = 90 b = 64.697 β = 95.63 c = 44.428 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAR scanner 345 mm plate 2013-07-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU 1.54
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 50 97.6 15.3 3.2 27403
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.6 44.21 26014 1373 97.08 0.20018 0.19844 0.2062 0.23345 0.2357 RANDOM 28.516
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.27 -0.32 0.43 -0.09
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.358 r_dihedral_angle_4_deg 14.76 r_dihedral_angle_3_deg 13.832 r_dihedral_angle_1_deg 6.924 r_long_range_B_refined 6.731 r_long_range_B_other 6.686 r_scangle_other 4.489 r_mcangle_it 3.694 r_mcangle_other 3.692 r_scbond_it 2.829
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.358 r_dihedral_angle_4_deg 14.76 r_dihedral_angle_3_deg 13.832 r_dihedral_angle_1_deg 6.924 r_long_range_B_refined 6.731 r_long_range_B_other 6.686 r_scangle_other 4.489 r_mcangle_it 3.694 r_mcangle_other 3.692 r_scbond_it 2.829 r_scbond_other 2.828 r_mcbond_it 2.258 r_mcbond_other 2.257 r_angle_refined_deg 1.889 r_angle_other_deg 1.309 r_chiral_restr 0.091 r_bond_refined_d 0.012 r_bond_other_d 0.007 r_gen_planes_refined 0.007 r_gen_planes_other 0.006 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1665 Nucleic Acid Atoms Solvent Atoms 222 Heterogen Atoms 118
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling MOLREP phasing