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The PIAS-like coactivator Zmiz1 is a direct and selective cofactor of Notch1 in T-cell development and leukemia
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 4.5 2.5 M SODIUM CHLORIDE, 0.2 M LITHIUM SULFATE AND 0.1 M SODIUM ACETATE PH4.5
Crystal Properties Matthews coefficient Solvent content 2.3 46.67
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 43.472 α = 90 b = 45.04 β = 90 c = 57.518 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 CCD MARRESEARCH 2012-08-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-D APS 21-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 50 98.2 0.1 32.85 10.2 12677 -2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.7 1.73 95.4 0.44 3.65 8.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT NONE 1.7 35.46 12026 622 98.13 0.16061 0.15839 0.1676 0.20441 0.2076 RANDOM 18.335
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.17 0.49 -0.32
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.373 r_dihedral_angle_4_deg 16.958 r_dihedral_angle_3_deg 11.542 r_dihedral_angle_1_deg 4.896 r_scbond_it 3.792 r_mcangle_it 2.47 r_angle_refined_deg 1.913 r_mcbond_it 1.7 r_mcbond_other 1.636 r_angle_other_deg 0.953
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.373 r_dihedral_angle_4_deg 16.958 r_dihedral_angle_3_deg 11.542 r_dihedral_angle_1_deg 4.896 r_scbond_it 3.792 r_mcangle_it 2.47 r_angle_refined_deg 1.913 r_mcbond_it 1.7 r_mcbond_other 1.636 r_angle_other_deg 0.953 r_chiral_restr 0.117 r_bond_refined_d 0.021 r_gen_planes_refined 0.011 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 870 Nucleic Acid Atoms Solvent Atoms 131 Heterogen Atoms 9
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling HKL-3000 phasing