4ZN3

Crystal Structure of MjSpt4:Spt5 complex conformation B


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.5295PEG 6000, MPD, MES
Crystal Properties
Matthews coefficientSolvent content
3.8367.89

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 45.395α = 90
b = 88.943β = 90
c = 91.955γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315r2013-12-16MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSSRF BEAMLINE BL17U0.97915SSRFBL17U

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.35099.415.54.11713917139
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.32.341000.483.34.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT4ZN12.3501623586499.330.228850.227440.25569RANDOM62.609
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
3.38-2.3-1.07
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.192
r_dihedral_angle_3_deg15.05
r_dihedral_angle_4_deg10.826
r_long_range_B_refined5.63
r_long_range_B_other5.603
r_dihedral_angle_1_deg5.215
r_scangle_other3.613
r_mcangle_it3.222
r_mcangle_other3.221
r_scbond_it2.136
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.192
r_dihedral_angle_3_deg15.05
r_dihedral_angle_4_deg10.826
r_long_range_B_refined5.63
r_long_range_B_other5.603
r_dihedral_angle_1_deg5.215
r_scangle_other3.613
r_mcangle_it3.222
r_mcangle_other3.221
r_scbond_it2.136
r_scbond_other2.135
r_mcbond_it1.95
r_mcbond_other1.949
r_angle_refined_deg1.172
r_angle_other_deg0.866
r_chiral_restr0.066
r_bond_refined_d0.006
r_gen_planes_refined0.004
r_bond_other_d0.002
r_gen_planes_other0.002
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1634
Nucleic Acid Atoms
Solvent Atoms44
Heterogen Atoms15

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data scaling
PHASERphasing