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Crystal structure of the RING finger domain of Slx1 in complex with the C-terminal domain of Slx4
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.8 291 1.34M ammonium sulfate, 0.1M Bis-Tris, pH 6.8
Crystal Properties Matthews coefficient Solvent content 4.09 69.97
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 85.233 α = 90 b = 85.233 β = 90 c = 74.835 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2014-06-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRF BEAMLINE BL17U 1.28238 SSRF BL17U
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 50 100 0.109 0.109 28.9 14.9 36121 36121 -3 31.9
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.07 100 0.483 7.8 14.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2 38.1 34383 1729 99.8 0.21617 0.21511 0.2125 0.23631 0.2322 RANDOM 32.398
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.34 -1.34 2.68
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.93 r_dihedral_angle_4_deg 15.966 r_dihedral_angle_3_deg 11.885 r_dihedral_angle_1_deg 4.819 r_scangle_it 3.462 r_scbond_it 2.085 r_mcangle_it 1.591 r_angle_refined_deg 1.139 r_mcbond_it 0.849 r_chiral_restr 0.085
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.93 r_dihedral_angle_4_deg 15.966 r_dihedral_angle_3_deg 11.885 r_dihedral_angle_1_deg 4.819 r_scangle_it 3.462 r_scbond_it 2.085 r_mcangle_it 1.591 r_angle_refined_deg 1.139 r_mcbond_it 0.849 r_chiral_restr 0.085 r_bond_refined_d 0.012 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2217 Nucleic Acid Atoms Solvent Atoms 107 Heterogen Atoms 39
Software Software Software Name Purpose REFMAC refinement SCALEPACK data reduction HKL-2000 data scaling PHENIX phasing