X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.52930.1 M Sodium Acetate pH 6.5, 20% PEG1500, 20% Glycerol, 3% Methanol
Crystal Properties
Matthews coefficientSolvent content
2.448.77

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 80.73α = 90
b = 104.39β = 111.55
c = 89.89γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELPSI PILATUS 6M2013-05-24MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSOLEIL BEAMLINE PROXIMA 20.9801SOLEILPROXIMA 2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.4444.2899.1114.693.699432925516
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.4432.5394.59

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT2.4444.2824239127699.090.226770.224520.26991RANDOM64.221
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.14-1.42.28-0.79
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.379
r_dihedral_angle_3_deg16.289
r_dihedral_angle_4_deg13.14
r_long_range_B_other7.914
r_long_range_B_refined7.913
r_scangle_other6.27
r_dihedral_angle_1_deg6.2
r_mcangle_it5.182
r_mcangle_other5.181
r_scbond_it4.409
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.379
r_dihedral_angle_3_deg16.289
r_dihedral_angle_4_deg13.14
r_long_range_B_other7.914
r_long_range_B_refined7.913
r_scangle_other6.27
r_dihedral_angle_1_deg6.2
r_mcangle_it5.182
r_mcangle_other5.181
r_scbond_it4.409
r_scbond_other4.409
r_mcbond_it3.499
r_mcbond_other3.455
r_angle_refined_deg1.711
r_angle_other_deg0.865
r_chiral_restr0.086
r_gen_planes_refined0.02
r_gen_planes_other0.017
r_bond_refined_d0.016
r_bond_other_d0.002
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3180
Nucleic Acid Atoms
Solvent Atoms14
Heterogen Atoms10

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
XSCALEdata scaling