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Crystal structure of KPT276 in complex with CRM1-Ran-RanBP1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.6 293 0.1M Bis-Tris pH 6.6, 0.2M NH4NO3 and 18% PEG3350
Crystal Properties Matthews coefficient Solvent content 2.71 54.56
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 105.909 α = 90 b = 105.909 β = 90 c = 305.526 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 93 CCD ADSC QUANTUM 315r 2013-10-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.97924 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 50 99.6 0.068 9.7 7.4 159687
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.83 96.3 3.5 7599
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.8 50 7989 99.1 0.139 0.1365 0.1456 0.1835 0.1903 RANDOM 45.781
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.37 -0.37 0.74
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 41.846 r_dihedral_angle_2_deg 35.946 r_sphericity_bonded 23.385 r_dihedral_angle_4_deg 17.561 r_dihedral_angle_3_deg 12.899 r_dihedral_angle_1_deg 5.029 r_mcangle_it 4.769 r_mcbond_it 4.048 r_mcbond_other 4.041 r_rigid_bond_restr 2.785
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 41.846 r_dihedral_angle_2_deg 35.946 r_sphericity_bonded 23.385 r_dihedral_angle_4_deg 17.561 r_dihedral_angle_3_deg 12.899 r_dihedral_angle_1_deg 5.029 r_mcangle_it 4.769 r_mcbond_it 4.048 r_mcbond_other 4.041 r_rigid_bond_restr 2.785 r_angle_refined_deg 1.183 r_angle_other_deg 0.77 r_chiral_restr 0.066 r_bond_refined_d 0.007 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 10947 Nucleic Acid Atoms Solvent Atoms 1369 Heterogen Atoms 97
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction PDB_EXTRACT data extraction d*TREK data scaling MOLREP phasing