X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP2930.1 M HEPES pH7.5, 25% PEG4000, 0.3 M Lithium Sulfate, 0.1 M Sodium Acetate
Crystal Properties
Matthews coefficientSolvent content
2.4349.35

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 63.27α = 109.3
b = 68.07β = 92.98
c = 87.13γ = 117.23
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray173PIXELDECTRIS PILATUS 6M2013-12-07MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSOLEIL BEAMLINE PROXIMA 20.987SOLEILPROXIMA 2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.335096.911.423.1849021

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT2.3349.0446561245197.080.204790.202290.25265RANDOM32.394
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.550.470.520.810.3-1.97
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.855
r_dihedral_angle_4_deg14.907
r_dihedral_angle_3_deg14.281
r_long_range_B_refined6.264
r_long_range_B_other6.264
r_dihedral_angle_1_deg5.732
r_scangle_other5.29
r_mcangle_it4.271
r_mcangle_other4.271
r_scbond_other3.938
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.855
r_dihedral_angle_4_deg14.907
r_dihedral_angle_3_deg14.281
r_long_range_B_refined6.264
r_long_range_B_other6.264
r_dihedral_angle_1_deg5.732
r_scangle_other5.29
r_mcangle_it4.271
r_mcangle_other4.271
r_scbond_other3.938
r_scbond_it3.937
r_mcbond_it3.116
r_mcbond_other3.113
r_angle_refined_deg1.454
r_angle_other_deg0.851
r_chiral_restr0.08
r_gen_planes_refined0.015
r_bond_refined_d0.014
r_gen_planes_other0.011
r_bond_other_d0.01
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms8337
Nucleic Acid Atoms
Solvent Atoms282
Heterogen Atoms92

Software

Software
Software NamePurpose
REFMACrefinement