X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP829520% PEG 3000, 100 mM Imidazole pH 8.0, 200 mM ZnAc
Crystal Properties
Matthews coefficientSolvent content
3.0960.18

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 91.912α = 90
b = 91.912β = 90
c = 60.359γ = 120
Symmetry
Space GroupP 63

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315r2012-07-23MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-ID1APS19-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.730.199.435.94.58009

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT2.70530.1800580399.440.19220.18820.2266RANDOM60.811
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.07-0.03-0.070.21
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.233
r_dihedral_angle_4_deg19.458
r_dihedral_angle_3_deg12.649
r_dihedral_angle_1_deg6.573
r_mcangle_it2.869
r_mcbond_it1.837
r_mcbond_other1.835
r_angle_refined_deg1.459
r_angle_other_deg0.912
r_chiral_restr0.072
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.233
r_dihedral_angle_4_deg19.458
r_dihedral_angle_3_deg12.649
r_dihedral_angle_1_deg6.573
r_mcangle_it2.869
r_mcbond_it1.837
r_mcbond_other1.835
r_angle_refined_deg1.459
r_angle_other_deg0.912
r_chiral_restr0.072
r_bond_refined_d0.008
r_gen_planes_refined0.006
r_bond_other_d0.003
r_gen_planes_other0.003
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1676
Nucleic Acid Atoms
Solvent Atoms9
Heterogen Atoms1

Software

Software
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction