Structure of the ryanodine receptor at resolution of 6.1 A in closed state
ELECTRON MICROSCOPY
Sample
RYANODINE RECEPTOR 1
Specimen Preparation
Sample Aggregation State
PARTICLE
Vitrification Instrument
HOMEMADE PLUNGER
Cryogen Name
ETHANE
Sample Vitrification Details
LIQUID ETHANE
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
25000
Reported Resolution (Å)
6.1
Resolution Method
Other Details
THE MODEL WAS BUILD BY RIGID BODY DOCKING OF CRYSTAL STRUCTURES OF ABC DOMAIN PDB CODE 2 AOX, RESIDUES 1-394, REPEAT 3-4 DOMAIN(PHOSPHORYLATION DOMAIN ...
THE MODEL WAS BUILD BY RIGID BODY DOCKING OF CRYSTAL STRUCTURES OF ABC DOMAIN PDB CODE 2 AOX, RESIDUES 1-394, REPEAT 3-4 DOMAIN(PHOSPHORYLATION DOMAIN), RESIDUES 2,734- 2,939, PDB CODE 4ERT, REPEAT 1-2 DOMAIN, RESIDUES 851-1, 053, HOMOLOGY MODELLED BASED ON CRYSTAL STRUCTURE OF REPEAT3-4 DOMAIN, EF-HAND DOMAIN,RESIDUES 4,084-4,135, HOMOLOGY MODELLED IN PHYRE2, SPRY1 DOMAIN , RESIDUES 646- 842, SPRY2 DOMAIN , RESIDUES 1,070-1,310, AND SPRY 3 DOMAIN, RESIDUES 1,420-1,571,WERE MODELLED IN ROBETTA. THE REST OF THE MODEL WAS BUILT AS POLY ALANINE CHAIN FOR WHICH APPOXIMATE RESIDUE NUMBERS ARE GIVEN. IN ADDITION FOR THE ALPHA-SOLENOID 2 DOMAIN, RESIDUES CA.1,920-2,730 AND CA. 2,940-3,500, THE DIRECTIONALITY OF THE CHAIN IS NOT KNOWN. SEQUENCE OF CHAINS A,B,C,D MGDGGEGEDEVQFLRTDDEVVLQCSATVLKEQLKLCLAAEGFGNRLCFLEPTSNAQNVPPDLAICCFT SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-2751. (DEPOSITION ID: 12695).
