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Crystal structure of Chicken egg white lysozyme adduct with Organophosphorus pesticide Monochrotophos
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.5 289 Sodium Acetate, Sodium Chloride
Crystal Properties Matthews coefficient Solvent content 2 38.53
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 78.72 α = 90 b = 78.72 β = 90 c = 37.02 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAR scanner 345 mm plate 2012-07-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE BRUKER AXS MICROSTAR 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.925 78.7 90.1 4 3.8 15434
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.925 35.2 14615 771 87.87 0.17465 0.17189 0.1798 0.22908 0.2401 RANDOM 16.657
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 3.38 3.38 -6.75
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.729 r_dihedral_angle_4_deg 17.912 r_dihedral_angle_3_deg 15.433 r_dihedral_angle_1_deg 6.738 r_long_range_B_refined 3.881 r_long_range_B_other 3.791 r_angle_refined_deg 1.857 r_scangle_other 1.853 r_mcangle_it 1.839 r_mcangle_other 1.838
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.729 r_dihedral_angle_4_deg 17.912 r_dihedral_angle_3_deg 15.433 r_dihedral_angle_1_deg 6.738 r_long_range_B_refined 3.881 r_long_range_B_other 3.791 r_angle_refined_deg 1.857 r_scangle_other 1.853 r_mcangle_it 1.839 r_mcangle_other 1.838 r_mcbond_it 1.17 r_mcbond_other 1.143 r_scbond_it 1.127 r_scbond_other 1.127 r_angle_other_deg 0.956 r_chiral_restr 0.124 r_bond_refined_d 0.013 r_gen_planes_refined 0.006 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2002 Nucleic Acid Atoms Solvent Atoms 232 Heterogen Atoms 34
Software Software Software Name Purpose REFMAC refinement