X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.529822% PEG 3350, 300 mM ammonium Sulfate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.6453.35

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 89.775α = 90
b = 96.498β = 90
c = 136.345γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 3152014-05-07MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 5.0.10.997ALS5.0.1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.95099.90.09217.27.2271481
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.9399.60.5293.97.1

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.95025484137899.740.220780.218890.25637RANDOM74.553
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
3.180.66-3.84
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg45.991
r_dihedral_angle_4_deg23.527
r_dihedral_angle_3_deg17.485
r_long_range_B_refined6.522
r_long_range_B_other6.522
r_dihedral_angle_1_deg5.072
r_scangle_other3.72
r_mcangle_it3.263
r_mcangle_other3.105
r_scbond_it2.556
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg45.991
r_dihedral_angle_4_deg23.527
r_dihedral_angle_3_deg17.485
r_long_range_B_refined6.522
r_long_range_B_other6.522
r_dihedral_angle_1_deg5.072
r_scangle_other3.72
r_mcangle_it3.263
r_mcangle_other3.105
r_scbond_it2.556
r_scbond_other2.221
r_mcbond_it1.98
r_mcbond_other1.98
r_angle_other_deg1.535
r_angle_refined_deg1.528
r_chiral_restr0.077
r_bond_refined_d0.013
r_bond_other_d0.008
r_gen_planes_refined0.008
r_gen_planes_other0.007
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms7865
Nucleic Acid Atoms
Solvent Atoms6
Heterogen Atoms10

Software

Software
Software NamePurpose
ADSCdata collection
PHASERphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling