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Crystal structure of computational designed leucine rich repeats DLRR_A in space group P21
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6 298 22% PEG 3350, 0.1M MES, 0.2 M NaCl, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.27 45.83
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.583 α = 90 b = 145.006 β = 115.35 c = 57.7 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 HF 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.36 25.01 96.7 0.081 24 5.7 35346 34180 2 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.36 2.44 83.7 0.183 6.4 3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.4 25.01 30991 1658 97.54 0.18603 0.18352 0.1886 0.23309 0.2331 RANDOM 31.777
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.22 -0.16 0.79 -0.59
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 48.854 r_dihedral_angle_3_deg 13.519 r_dihedral_angle_4_deg 7.548 r_dihedral_angle_1_deg 5.912 r_long_range_B_refined 3.511 r_long_range_B_other 3.511 r_angle_refined_deg 1.609 r_mcangle_it 1.466 r_scangle_other 1.443 r_angle_other_deg 1.363
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 48.854 r_dihedral_angle_3_deg 13.519 r_dihedral_angle_4_deg 7.548 r_dihedral_angle_1_deg 5.912 r_long_range_B_refined 3.511 r_long_range_B_other 3.511 r_angle_refined_deg 1.609 r_mcangle_it 1.466 r_scangle_other 1.443 r_angle_other_deg 1.363 r_mcangle_other 1.338 r_scbond_it 0.978 r_scbond_other 0.867 r_mcbond_it 0.858 r_mcbond_other 0.851 r_chiral_restr 0.091 r_bond_refined_d 0.014 r_bond_other_d 0.008 r_gen_planes_refined 0.008 r_gen_planes_other 0.005 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6712 Nucleic Acid Atoms Solvent Atoms 349 Heterogen Atoms
Software Software Software Name Purpose CrystalClear data collection PHASER phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling