X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP52890.1 M NaCitrate pH 5, 22% (w/v) PEG 6000
Crystal Properties
Matthews coefficientSolvent content
2.8256.6

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 66.23α = 90
b = 89.93β = 115.08
c = 78.09γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315r1999-10-06MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID23-11.0723ESRFID23-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.944.9799.60.0768.34.16480964089
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.91.941000.3822.64.1

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT1.938.4261793327199.570.206530.205020.23548RANDOM31.634
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
29.7215.41-19.78-9.94
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg29.014
r_dihedral_angle_3_deg13.923
r_dihedral_angle_4_deg13.003
r_dihedral_angle_1_deg6.661
r_long_range_B_other4.23
r_long_range_B_refined4.229
r_scangle_other3.067
r_mcangle_it2.734
r_mcangle_other2.734
r_scbond_other2.254
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg29.014
r_dihedral_angle_3_deg13.923
r_dihedral_angle_4_deg13.003
r_dihedral_angle_1_deg6.661
r_long_range_B_other4.23
r_long_range_B_refined4.229
r_scangle_other3.067
r_mcangle_it2.734
r_mcangle_other2.734
r_scbond_other2.254
r_scbond_it2.253
r_mcbond_it2.087
r_mcbond_other2.083
r_angle_refined_deg1.823
r_angle_other_deg1.742
r_chiral_restr0.119
r_bond_refined_d0.022
r_gen_planes_refined0.016
r_bond_other_d0.014
r_gen_planes_other0.011
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4741
Nucleic Acid Atoms
Solvent Atoms232
Heterogen Atoms8

Software

Software
Software NamePurpose
REFMACrefinement