4NOH

1.5 Angstrom Crystal Structure of Putative Lipoprotein from Bacillus anthracis.


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP9295Protein: 7.5 mG/mL, 0.5 M Sodium chloride, 0.01 M Tris-HCL buffer pH 8.3; Screen: PACT (C3), 0.1M MMT buffer pH 9.0, 25% (v/v) PEG 1500, VAPOR DIFFUSION, SITTING DROP, temperature 295K
Crystal Properties
Matthews coefficientSolvent content
1.8633.98

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 40.927α = 90
b = 74.267β = 91.9
c = 47.382γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARMOSAIC 300 mm CCDMirrors2013-10-14MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 21-ID-D0.97911APS21-ID-D

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.53099.50.0860.08619.43.84469244692-318.6
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.51.5398.70.570.572.43.72214

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.50229.224239142391225498.870.162830.162830.160980.19709RANDOM22.334
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.580.080.61-0.04
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.171
r_dihedral_angle_4_deg11.146
r_dihedral_angle_3_deg9.399
r_long_range_B_refined6.072
r_long_range_B_other5.996
r_dihedral_angle_1_deg3.592
r_scangle_other3.421
r_scbond_it2.206
r_scbond_other2.204
r_mcangle_other1.859
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.171
r_dihedral_angle_4_deg11.146
r_dihedral_angle_3_deg9.399
r_long_range_B_refined6.072
r_long_range_B_other5.996
r_dihedral_angle_1_deg3.592
r_scangle_other3.421
r_scbond_it2.206
r_scbond_other2.204
r_mcangle_other1.859
r_mcangle_it1.858
r_angle_refined_deg1.523
r_mcbond_it1.182
r_mcbond_other1.178
r_angle_other_deg0.695
r_chiral_restr0.092
r_gen_planes_refined0.018
r_gen_planes_other0.017
r_bond_refined_d0.01
r_bond_other_d0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2618
Nucleic Acid Atoms
Solvent Atoms289
Heterogen Atoms1

Software

Software
Software NamePurpose
Blu-Icedata collection
SHELXSphasing
REFMACrefinement
HKL-3000data reduction
HKL-3000data scaling