☰ Navigation Tabs
Zinc Substituted Reaction Center of the Rhodobacter sphaeroides
Crystallization Crystal Properties Matthews coefficient Solvent content 5.66 78.26
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 139.45 α = 90 b = 139.45 β = 90 c = 184.181 γ = 120
Symmetry Space Group P 31 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray CCD ADSC QUANTUM 315r M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL7-1 1.12709 SSRL BL7-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.85 120.767 96.3 0.105 10.5 6.2 46994
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 2.85 36.91 44588 2368 96.03 0.1846 0.18161 0.1816 0.24262 0.2408 RANDOM 58.402
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.78 0.78 0.78 -2.54
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.575 r_dihedral_angle_4_deg 18.516 r_dihedral_angle_3_deg 16.662 r_dihedral_angle_1_deg 5.981 r_angle_refined_deg 2.584 r_chiral_restr 0.12 r_bond_refined_d 0.011 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.575 r_dihedral_angle_4_deg 18.516 r_dihedral_angle_3_deg 16.662 r_dihedral_angle_1_deg 5.981 r_angle_refined_deg 2.584 r_chiral_restr 0.12 r_bond_refined_d 0.011 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_it r_mcbond_other r_mcangle_it r_mcangle_other r_scbond_it r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6463 Nucleic Acid Atoms Solvent Atoms 274 Heterogen Atoms 838
Software Software Software Name Purpose SCALA data scaling REFMAC refinement PDB_EXTRACT data extraction