X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1microbatch, sitting drop6.529530% (v/v) 2-ethoxyethanol, pH 6.5, microbatch, sitting drop, temperature 295K
Crystal Properties
Matthews coefficientSolvent content
3.1761.22

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 89.766α = 84.15
b = 91.5β = 72.42
c = 93.808γ = 90.01
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDRAYONIX MX-2252009-12-10MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 31-ID0.9793APS31-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.329197.50.099.63.9119216
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.322.492.10.5883.411317

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.3290.91119153600897.270.20210.19970.2474RANDOM45.984
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.28-0.230.06-0.490.891.55
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.187
r_dihedral_angle_3_deg20.016
r_dihedral_angle_4_deg19.54
r_dihedral_angle_1_deg5.972
r_scangle_it4.452
r_scbond_it2.74
r_angle_refined_deg1.743
r_mcangle_it1.576
r_mcbond_it0.813
r_chiral_restr0.126
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.187
r_dihedral_angle_3_deg20.016
r_dihedral_angle_4_deg19.54
r_dihedral_angle_1_deg5.972
r_scangle_it4.452
r_scbond_it2.74
r_angle_refined_deg1.743
r_mcangle_it1.576
r_mcbond_it0.813
r_chiral_restr0.126
r_bond_refined_d0.018
r_gen_planes_refined0.007
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms15367
Nucleic Acid Atoms
Solvent Atoms445
Heterogen Atoms116

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
MOLREPphasing
REFMACrefinement
PDB_EXTRACTdata extraction
HKL-2000data collection
HKL-2000data reduction