☰ Navigation Tabs
Crystal Structure of a GH48 cellobiohydrolase from Caldicellulosiruptor bescii
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.5 287 18% PEG 4000,0.1 M Tris-Bis,18% 2-Propanol , pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 287K
Crystal Properties Matthews coefficient Solvent content 2.33 47.14
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 116.123 α = 90 b = 57.562 β = 102.57 c = 106.469 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD 2011-05-28 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON 1.000
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 50 99.6 0.061 17.9 7.3 75252
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.7 1.76 99.9 0.405 7.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.7 38.49 70407 3730 97.92 0.21713 0.21627 0.2217 0.23335 0.2388 RANDOM 33.655
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.7 -0.29 1.56 -2
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.991 r_dihedral_angle_3_deg 16.286 r_dihedral_angle_4_deg 14.459 r_dihedral_angle_1_deg 5.757 r_angle_refined_deg 0.954 r_angle_other_deg 0.726 r_mcangle_it 0.489 r_mcbond_it 0.26 r_mcbond_other 0.26 r_scbond_it 0.14
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.991 r_dihedral_angle_3_deg 16.286 r_dihedral_angle_4_deg 14.459 r_dihedral_angle_1_deg 5.757 r_angle_refined_deg 0.954 r_angle_other_deg 0.726 r_mcangle_it 0.489 r_mcbond_it 0.26 r_mcbond_other 0.26 r_scbond_it 0.14 r_chiral_restr 0.057 r_bond_refined_d 0.005 r_bond_other_d 0.005 r_gen_planes_refined 0.003 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5070 Nucleic Acid Atoms Solvent Atoms 216 Heterogen Atoms 8
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction