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Crystal structure of N-terminal 618-residue fragment of LepB from Legionella pneumophila
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 EVAPORATION 6.5 293 0.1M citrate, 20% MPEG 2000, pH 6.5, EVAPORATION, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.57 52.09
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 101.536 α = 90 b = 159.418 β = 90 c = 181.146 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 200 CCD ADSC QUANTUM 315r 2012-04-19 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL41XU 0.9792 SPring-8 BL41XU
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.15 20 99.5 25525 13.5 35.44
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION SAD 3.16 19.95 25323 1269 99.52 0.2649 0.264 0.2514 0.2826 0.2905 43.1404
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 17.711 f_angle_d 1.168 f_chiral_restr 0.078 f_bond_d 0.012 f_plane_restr 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6691 Nucleic Acid Atoms Solvent Atoms 3 Heterogen Atoms 43
Software Software Software Name Purpose Blu-Ice data collection SHARP phasing PHENIX refinement HKL-2000 data reduction HKL-2000 data scaling