☰ Navigation Tabs
Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with 4-Hydroxybenzaldehyde
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6 283 Apo crystal grown in 500mM MES, pH 6.0. Soaked into 50mM 4-Hydroxybenzaldehyde, 25% MPD pH 4.5 (30min-1hr), vapor diffusion, sitting drop, temperature 283K
Crystal Properties Matthews coefficient Solvent content 3.08 60.1
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 50.968 α = 90 b = 74.786 β = 90 c = 106.524 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 80 CCD ADSC QUANTUM 315r 2009-05-18 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.36 61.2 84262
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.36 30.15 84262 8444 95.59 0.1168 0.1143 0.1289 0.1394 0.1526 RANDOM 18.8622
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.07 1.77 -1.85
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.34 r_dihedral_angle_4_deg 27.042 r_dihedral_angle_3_deg 14.465 r_dihedral_angle_1_deg 6.014 r_scangle_it 5.41 r_scbond_it 4.048 r_mcangle_it 2.662 r_mcbond_it 1.856 r_rigid_bond_restr 1.777 r_angle_refined_deg 1.724
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.34 r_dihedral_angle_4_deg 27.042 r_dihedral_angle_3_deg 14.465 r_dihedral_angle_1_deg 6.014 r_scangle_it 5.41 r_scbond_it 4.048 r_mcangle_it 2.662 r_mcbond_it 1.856 r_rigid_bond_restr 1.777 r_angle_refined_deg 1.724 r_angle_other_deg 1.02 r_mcbond_other 0.672 r_chiral_restr 0.121 r_bond_refined_d 0.019 r_gen_planes_refined 0.011 r_gen_planes_other 0.003 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2328 Nucleic Acid Atoms Solvent Atoms 436 Heterogen Atoms 74
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction ADSC data collection DENZO data reduction SCALEPACK data scaling