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Crystal structure of Cry35Ab1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.5 289 0.72 M NaH2PO4, 0.08 M K2HPO4 and 0.2 M NaCl, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K
Crystal Properties Matthews coefficient Solvent content 2.11 41.75
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 48.664 α = 90 b = 65.128 β = 90 c = 117.431 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS IV++ 2002-05-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 50 99.3 0.056 17.6 11.5 35100 3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.85 95.3 0.292 2.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIR THROUGHOUT 1.8 15 31479 3504 99.1 0.187 0.181 0.1853 0.234 0.2354 RANDOM 25.84
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.95 1.42 -0.48
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.324 r_scangle_it 5.811 r_dihedral_angle_1_deg 4.851 r_scbond_it 3.873 r_mcangle_it 2.462 r_mcbond_it 1.531 r_angle_refined_deg 1.526 r_symmetry_hbond_refined 0.383 r_nbd_refined 0.225 r_symmetry_vdw_refined 0.206
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.324 r_scangle_it 5.811 r_dihedral_angle_1_deg 4.851 r_scbond_it 3.873 r_mcangle_it 2.462 r_mcbond_it 1.531 r_angle_refined_deg 1.526 r_symmetry_hbond_refined 0.383 r_nbd_refined 0.225 r_symmetry_vdw_refined 0.206 r_xyhbond_nbd_refined 0.166 r_chiral_restr 0.113 r_bond_refined_d 0.014 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_dihedral_angle_2_deg r_dihedral_angle_4_deg r_gen_planes_other r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3037 Nucleic Acid Atoms Solvent Atoms 288 Heterogen Atoms
Software Software Software Name Purpose CrystalClear data collection MLPHARE phasing REFMAC refinement d*TREK data reduction d*TREK data scaling