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The E41Q mutant of the amidase from Nesterenkonia sp. AN1 showing the result of Michael addition of acrylamide at the active site cysteine
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 298 0.2 M ammonium tartrate dibasic, 20% PEG 3350, vapor diffusion, sitting drop, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.41 48.87
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 76.102 α = 90 b = 115.452 β = 90 c = 65.933 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2010-07-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SOLEIL BEAMLINE PROXIMA 1 SOLEIL PROXIMA 1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.4 38.05 99.5 0.066 9.8 4.2 57302
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.4 1.45 98.6 0.384 3.2 4.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.4 38.05 57295 2909 99.5 0.174 0.173 0.1718 0.199 0.1981 RANDOM 17.02
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.5 -0.08 -0.42
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.612 r_dihedral_angle_4_deg 20.753 r_dihedral_angle_3_deg 11.637 r_dihedral_angle_1_deg 6.162 r_scangle_it 5.136 r_scbond_it 3.324 r_angle_refined_deg 2.481 r_mcangle_it 2.438 r_mcbond_it 1.507 r_chiral_restr 0.195
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.612 r_dihedral_angle_4_deg 20.753 r_dihedral_angle_3_deg 11.637 r_dihedral_angle_1_deg 6.162 r_scangle_it 5.136 r_scbond_it 3.324 r_angle_refined_deg 2.481 r_mcangle_it 2.438 r_mcbond_it 1.507 r_chiral_restr 0.195 r_bond_refined_d 0.034 r_gen_planes_refined 0.016 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1907 Nucleic Acid Atoms Solvent Atoms 313 Heterogen Atoms 15
Software Software Software Name Purpose d*TREK data scaling d*TREK data reduction PHASER phasing REFMAC refinement PDB_EXTRACT data extraction