X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1hanging drop5.5294sodium citrate, isopropanol, pH 5.5, hanging drop, temperature 294K
Crystal Properties
Matthews coefficientSolvent content
2.7755.67

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 129.238α = 90
b = 129.238β = 90
c = 122.972γ = 120
Symmetry
Space GroupP 65

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X25NSLSX25

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.355048173

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.3544.5548173212099.420.25410.25240.2915RANDOM19.8005
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
6.156.15-12.3
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.427
r_dihedral_angle_3_deg16.305
r_dihedral_angle_4_deg16.008
r_scangle_it7.991
r_scbond_it5.427
r_dihedral_angle_1_deg4.112
r_rigid_bond_restr3.863
r_mcangle_it3.509
r_mcbond_it2.238
r_angle_refined_deg1.283
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.427
r_dihedral_angle_3_deg16.305
r_dihedral_angle_4_deg16.008
r_scangle_it7.991
r_scbond_it5.427
r_dihedral_angle_1_deg4.112
r_rigid_bond_restr3.863
r_mcangle_it3.509
r_mcbond_it2.238
r_angle_refined_deg1.283
r_chiral_restr0.069
r_bond_refined_d0.009
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms7368
Nucleic Acid Atoms
Solvent Atoms23
Heterogen Atoms81

Software

Software
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction