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SYK in COMPLEX WITH LIGAND LASW836
Crystallization Crystal Properties Matthews coefficient Solvent content 2.43 49.47
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 39.501 α = 90 b = 84.227 β = 90 c = 89.819 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2008-07-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06DA 1.000 SLS X06DA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.37 38.12 94.7 0.088 5.1 12709
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.37 2.57 94.5 0.788 4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.37 38.12 12074 608 95.02 0.2409 0.2385 0.2453 0.2846 0.2947 RANDOM 63.765
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.04 -4.23 4.27
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.58 r_dihedral_angle_4_deg 18.692 r_dihedral_angle_3_deg 14.944 r_dihedral_angle_1_deg 5.742 r_scangle_it 4.336 r_scbond_it 3.234 r_mcangle_it 2.066 r_mcbond_it 1.626 r_angle_refined_deg 1.045 r_angle_other_deg 0.72
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.58 r_dihedral_angle_4_deg 18.692 r_dihedral_angle_3_deg 14.944 r_dihedral_angle_1_deg 5.742 r_scangle_it 4.336 r_scbond_it 3.234 r_mcangle_it 2.066 r_mcbond_it 1.626 r_angle_refined_deg 1.045 r_angle_other_deg 0.72 r_mcbond_other 0.335 r_symmetry_vdw_other 0.197 r_nbd_refined 0.193 r_nbtor_refined 0.181 r_nbd_other 0.176 r_xyhbond_nbd_refined 0.158 r_symmetry_hbond_refined 0.138 r_symmetry_vdw_refined 0.09 r_nbtor_other 0.083 r_chiral_restr 0.062 r_xyhbond_nbd_other 0.029 r_bond_refined_d 0.008 r_gen_planes_refined 0.004 r_gen_planes_other 0.003 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2121 Nucleic Acid Atoms Solvent Atoms 21 Heterogen Atoms 34
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction XDS data reduction XSCALE data scaling