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Crystal structure of carboxylesterase/phospholipase family protein from Francisella tularensis
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1FJ2 PDB ENTRY 1FJ2
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5.5 293 0.1 M ammonium acetate, 0.1 M Bis-Tris, 17% PEG10000, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.07 40.67
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 50.997 α = 94.89 b = 64.416 β = 90.12 c = 139.039 γ = 89.96
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD Beryllium lenses 2011-11-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-F 0.97872 APS 21-ID-F
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 30 94.4 0.078 8.4 1.9 58087 58087 -3 47.2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.5 2.54 97.5 0.36 2.2 1.8 2970
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 1FJ2 2.5 29.458 1.97 57489 57489 2972 94.3 0.204 0.1991 0.2103 0.2585 0.2533
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.4018 0.7993 -0.9668 -17.2951 -1.6765 14.8932
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 14.794 f_angle_d 0.802 f_chiral_restr 0.052 f_bond_d 0.003 f_plane_restr 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 13259 Nucleic Acid Atoms Solvent Atoms 458 Heterogen Atoms 5
Software Software Software Name Purpose Blu-Ice data collection MOLREP phasing PHENIX refinement HKL-2000 data reduction HKL-2000 data scaling