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Anabaena Tic22 (protein transport)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 9.5 292 1 M sodium citrate, 0.1 M CHES , pH 9.5, VAPOR DIFFUSION, SITTING DROP, temperature 292.0K 2 VAPOR DIFFUSION, SITTING DROP 9.5 292 1 M sodium citrate, 0.15mM MgCl2 0.1 M CHES, pH 9.5, VAPOR DIFFUSION, SITTING DROP, temperature 292.0K
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 67.168 α = 90 b = 111.19 β = 125.36 c = 44.152 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2009-06-14 M SINGLE WAVELENGTH 2 2 x-ray 100 CCD ADSC QUANTUM 315r 2009-09-05 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 0.933 ESRF ID23-1 2 SYNCHROTRON ESRF BEAMLINE ID23-1 0.9798, 0.9801, 0.9760 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 1.95 36.01 99.5 5.6 18.9 4.1 19667 19161 -3.7 -3.7 31
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2 1.95 1.98 99.9 38.2 2.4 4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.95 36.01 -4 19161 18184 977 99.42 0.1997 0.1997 0.19697 0.2077 0.24897 0.2604 RANDOM 40.657
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.76 -1.88 0.85 -1.27
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.566 r_dihedral_angle_4_deg 21.774 r_dihedral_angle_3_deg 17.672 r_dihedral_angle_1_deg 6.105 r_scangle_it 4.21 r_scbond_it 2.52 r_mcangle_it 1.79 r_angle_refined_deg 1.514 r_angle_other_deg 1.115 r_mcbond_it 0.989
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.566 r_dihedral_angle_4_deg 21.774 r_dihedral_angle_3_deg 17.672 r_dihedral_angle_1_deg 6.105 r_scangle_it 4.21 r_scbond_it 2.52 r_mcangle_it 1.79 r_angle_refined_deg 1.514 r_angle_other_deg 1.115 r_mcbond_it 0.989 r_mcbond_other 0.174 r_chiral_restr 0.081 r_bond_refined_d 0.015 r_gen_planes_refined 0.007 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1767 Nucleic Acid Atoms Solvent Atoms 150 Heterogen Atoms 43
Software Software Software Name Purpose DNA data collection SOLVE phasing REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling