X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17100 MM HEPES PH7.0, PEG 6000 20%, 10 MM ZNCL2
Crystal Properties
Matthews coefficientSolvent content
2.0338.86

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 68.13α = 90
b = 68.13β = 90
c = 92.27γ = 90
Symmetry
Space GroupP 43 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315rMSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID23-1ESRFID23-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.34899.20.125.526.510085
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.32.3692.80.923.923.7

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUTNONE2.330.47957648398.850.238030.235860.28406RANDOM56.727
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.1-0.10.19
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.935
r_dihedral_angle_4_deg19.064
r_dihedral_angle_3_deg18.166
r_dihedral_angle_1_deg5.939
r_mcangle_it2.587
r_scbond_it2.386
r_mcbond_it1.654
r_mcbond_other1.654
r_angle_refined_deg1.604
r_angle_other_deg1.258
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.935
r_dihedral_angle_4_deg19.064
r_dihedral_angle_3_deg18.166
r_dihedral_angle_1_deg5.939
r_mcangle_it2.587
r_scbond_it2.386
r_mcbond_it1.654
r_mcbond_other1.654
r_angle_refined_deg1.604
r_angle_other_deg1.258
r_chiral_restr0.087
r_bond_refined_d0.012
r_gen_planes_refined0.007
r_bond_other_d0.005
r_gen_planes_other0.004
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcangle_other
r_scbond_other
r_scangle_it
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1854
Nucleic Acid Atoms
Solvent Atoms28
Heterogen Atoms4

Software

Software
Software NamePurpose
REFMACrefinement
PHENIXphasing