3ZTJ

Structure of influenza A neutralizing antibody selected from cultures of single human plasma cells in complex with human H3 Influenza haemagglutinin.


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
5.6275

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 171.488α = 90
b = 193.428β = 90
c = 213.748γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray77CCDADSC CCDMSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND BEAMLINE I02DiamondI02

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
13.4143.496.10.12142.9970282
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
13.413.5593.20.61.62.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT3.41143.4288081464095.560.236710.23410.28434RANDOM152.486
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
3.56-4.841.28
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.585
r_dihedral_angle_3_deg20.412
r_dihedral_angle_4_deg17.278
r_dihedral_angle_1_deg8.236
r_scangle_it2.863
r_angle_refined_deg1.699
r_scbond_it1.529
r_angle_other_deg0.971
r_mcangle_it0.795
r_mcbond_it0.385
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.585
r_dihedral_angle_3_deg20.412
r_dihedral_angle_4_deg17.278
r_dihedral_angle_1_deg8.236
r_scangle_it2.863
r_angle_refined_deg1.699
r_scbond_it1.529
r_angle_other_deg0.971
r_mcangle_it0.795
r_mcbond_it0.385
r_chiral_restr0.089
r_mcbond_other0.057
r_bond_refined_d0.016
r_gen_planes_refined0.007
r_bond_other_d0.001
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms19934
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms450

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
AMoREphasing