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Structure of Pin1 Complex with 18-crown-6
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 277 2.0-2.5M ammonium sulfate, 0.1M HEPES (pH 7.5), 1mM DTT, 25mM crown ether, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.99 58.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 68.474 α = 90 b = 68.474 β = 90 c = 80.215 γ = 120
Symmetry Space Group P 31 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 200 CCD RAYONIX MX300HE 2012-10-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSRRC BEAMLINE BL13B1 0.97622 NSRRC BL13B1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 30 99.8 55.3 10.8 29196 29138 1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.6 24.39 28158 26733 1425 96.42 0.21164 0.21164 0.20976 0.2105 0.24725 0.2454 RANDOM 19.014
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.04 0.04 0.04 -0.14
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.228 r_dihedral_angle_4_deg 21.797 r_dihedral_angle_3_deg 15.022 r_long_range_B_refined 6.843 r_dihedral_angle_1_deg 6.51 r_scbond_it 3.545 r_mcangle_it 3.009 r_angle_refined_deg 2.72 r_mcbond_it 2.076 r_chiral_restr 0.192
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.228 r_dihedral_angle_4_deg 21.797 r_dihedral_angle_3_deg 15.022 r_long_range_B_refined 6.843 r_dihedral_angle_1_deg 6.51 r_scbond_it 3.545 r_mcangle_it 3.009 r_angle_refined_deg 2.72 r_mcbond_it 2.076 r_chiral_restr 0.192 r_bond_refined_d 0.029 r_gen_planes_refined 0.015
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1156 Nucleic Acid Atoms Solvent Atoms 181 Heterogen Atoms 49
Software Software Software Name Purpose HKL-2000 data collection MOLREP phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling