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Bond length analysis of asp, glu and his residues in subtilisin Carlsberg at 1.26A resolution
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1C3L PDB ENTRY 1C3L
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 BATCH 7.5 298 13% w/v sodium sulfate, pH 7.5, BATCH, temperature 298K
Crystal Properties Matthews coefficient Solvent content 1.99 38.1
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 52.099 α = 90 b = 55.159 β = 90 c = 75.453 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2005-04-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX10.1 0.98 SRS PX10.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.26 13.79 100 0.091 5.5 8.7 59740 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.26 1.33 100 0.57 1.2 6.9 7587
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 1C3L 1.26 13.79 1.34 59740 59740 3011 100 0.1192 0.1181 0.1062 0.1392 0.1314 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.3629 0.0614 0.3014
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 11.616 f_angle_d 1.495 f_chiral_restr 0.195 f_bond_d 0.011 f_plane_restr 0.008
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1918 Nucleic Acid Atoms Solvent Atoms 265 Heterogen Atoms 27
Software Software Software Name Purpose HKL-2000 data collection MLPHARE phasing PHENIX refinement MOSFLM data reduction SCALA data scaling