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Crystal structure of hSULT1A1 bound to PAP
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1LS6 pdb entry 1LS6
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7.5 293 Sodium chloride, HEPES, Polyethylene glycol 3,350, pH 7.5, VAPOR DIFFUSION, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.4 48.82
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 72.097 α = 90 b = 79.422 β = 90 c = 121.807 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2009-11-12 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-2 0.937 ESRF ID14-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 30 99.7 0.102 9.9 6.7 19798
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.7 2.75 100 0.526 7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT pdb entry 1LS6 2.7 30 18547 997 98.49 0.22296 0.21895 0.2234 0.29885 0.3002 RANDOM 40.174
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -5.04 8.02 -2.98
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.102 r_dihedral_angle_4_deg 25.084 r_dihedral_angle_3_deg 19.573 r_dihedral_angle_1_deg 6.177 r_scangle_it 2.366 r_angle_refined_deg 1.506 r_scbond_it 1.452 r_angle_other_deg 0.903 r_mcangle_it 0.86 r_mcbond_it 0.453
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.102 r_dihedral_angle_4_deg 25.084 r_dihedral_angle_3_deg 19.573 r_dihedral_angle_1_deg 6.177 r_scangle_it 2.366 r_angle_refined_deg 1.506 r_scbond_it 1.452 r_angle_other_deg 0.903 r_mcangle_it 0.86 r_mcbond_it 0.453 r_mcbond_other 0.088 r_chiral_restr 0.081 r_bond_refined_d 0.014 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4686 Nucleic Acid Atoms Solvent Atoms 22 Heterogen Atoms 54
Software Software Software Name Purpose SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data reduction