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Structure of Tsi2, a Tse2-immunity protein from Pseudomonas aeruginosa
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5 298 8% PEG 4000, 0.1M sodium acetate, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 1.71 28.17
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 27.807 α = 110.48 b = 34.063 β = 95.94 c = 37.65 γ = 95.82
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2009-11-25 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.2 0.9792, 0.9075 ALS 8.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 0.99 50 100 0.035 31.2 3.7 60521 60521
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 0.99 1.01 45 0.197 3.7 2.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1 34.88 60521 60525 3246 91.24 0.14655 0.14496 0.1547 0.17613 0.185 RANDOM 10.798
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.45 0.31 -0.08 0.4 -0.02 -0.81
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.879 r_dihedral_angle_4_deg 29.886 r_sphericity_free 11.585 r_scangle_it 7.958 r_sphericity_bonded 7.616 r_scbond_it 5.896 r_dihedral_angle_1_deg 5.029 r_mcangle_it 4.411 r_rigid_bond_restr 3.456 r_mcbond_it 3.07
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.879 r_dihedral_angle_4_deg 29.886 r_sphericity_free 11.585 r_scangle_it 7.958 r_sphericity_bonded 7.616 r_scbond_it 5.896 r_dihedral_angle_1_deg 5.029 r_mcangle_it 4.411 r_rigid_bond_restr 3.456 r_mcbond_it 3.07 r_angle_refined_deg 1.7 r_mcbond_other 1.168 r_angle_other_deg 1.022 r_chiral_restr 0.094 r_bond_refined_d 0.018 r_gen_planes_refined 0.008 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_dihedral_angle_3_deg r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1271 Nucleic Acid Atoms Solvent Atoms 175 Heterogen Atoms
Software Software Software Name Purpose ADSC data collection SOLVE phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling