3QHQ

Structure of CRISPR-associated protein Csn2


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.82770.1M Hepes, 12% PEG 6000, 0.05M Phenole, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
3.0559.74

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 75.3α = 90
b = 83.3β = 109.4
c = 110.4γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray173CCDMAR CCD 165 mm2010-11-05MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE BM30A0.979981ESRFBM30A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
125099.40.02636.514.5343206233.334
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
122.0597.90.1797.394.23103

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Cut-off Sigma (I)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT219.5724320641031217499.420.20480.20360.2277RANDOM35.4208
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.540.641.12-1.24
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.101
r_dihedral_angle_3_deg12.876
r_dihedral_angle_4_deg7.786
r_dihedral_angle_1_deg4.857
r_scangle_it1.676
r_angle_refined_deg1.026
r_scbond_it0.994
r_mcangle_it0.671
r_mcbond_it0.361
r_chiral_restr0.074
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.101
r_dihedral_angle_3_deg12.876
r_dihedral_angle_4_deg7.786
r_dihedral_angle_1_deg4.857
r_scangle_it1.676
r_angle_refined_deg1.026
r_scbond_it0.994
r_mcangle_it0.671
r_mcbond_it0.361
r_chiral_restr0.074
r_bond_refined_d0.008
r_gen_planes_refined0.003
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3489
Nucleic Acid Atoms
Solvent Atoms296
Heterogen Atoms17

Software

Software
Software NamePurpose
BESTdata collection
Auto-Rickshawphasing
REFMACrefinement
XDSdata reduction
XSCALEdata scaling