X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP80.2 M ammonium nitrate, 20% PEG3350, 0.01 M Tris-HCl, pH 8.0, 100 mM sodium chloride, VAPOR DIFFUSION, HANGING DROP
Crystal Properties
Matthews coefficientSolvent content
1.8834.73

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 71.733α = 90
b = 71.733β = 90
c = 54.236γ = 120
Symmetry
Space GroupP 32 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray200CCDMARMOSAIC 300 mm CCD2010-02-18MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 21-ID-G0.97856APS21-ID-G

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.45095.90.0861013.13195630636
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.41.4269.40.4355.61094

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.4403194030628155695.90.16370.16330.1717RANDOM15.6966
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.560.280.56-0.84
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.273
r_dihedral_angle_4_deg15.447
r_dihedral_angle_3_deg11.685
r_dihedral_angle_1_deg5.56
r_scangle_it3.662
r_scbond_it2.12
r_mcangle_it1.244
r_angle_refined_deg1.183
r_mcbond_it0.66
r_chiral_restr0.079
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.273
r_dihedral_angle_4_deg15.447
r_dihedral_angle_3_deg11.685
r_dihedral_angle_1_deg5.56
r_scangle_it3.662
r_scbond_it2.12
r_mcangle_it1.244
r_angle_refined_deg1.183
r_mcbond_it0.66
r_chiral_restr0.079
r_bond_refined_d0.008
r_gen_planes_refined0.006
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms853
Nucleic Acid Atoms
Solvent Atoms126
Heterogen Atoms7

Software

Software
Software NamePurpose
SCALEPACKdata scaling
RESOLVEphasing
REFMACrefinement
PDB_EXTRACTdata extraction
HKL-2000data collection
DENZOdata reduction
PHENIXphasing