3OOS

The structure of an alpha/beta fold family hydrolase from Bacillus anthracis str. Sterne


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP7.52770.2M ammonium sulfate, 0.1M HEPES pH7.5, 16%w/v PEG4000, 10%w/v isopropanol, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
2.6653.77

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 73.717α = 90
b = 80.839β = 90
c = 113.867γ = 90
Symmetry
Space GroupI 2 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDSBC-3mirror2010-07-22MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-BM0.9797APS19-BM

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.66501000.04356.037.34078040780
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.661.691000.1811262017

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.6565.923873238732204099.940.149190.149190.147480.18189RANDOM16.043
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.160.110.05
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.774
r_dihedral_angle_4_deg15.479
r_dihedral_angle_3_deg11.908
r_dihedral_angle_1_deg5.093
r_scangle_it2.103
r_scbond_it1.299
r_angle_refined_deg0.897
r_mcangle_it0.775
r_rigid_bond_restr0.533
r_mcbond_it0.408
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.774
r_dihedral_angle_4_deg15.479
r_dihedral_angle_3_deg11.908
r_dihedral_angle_1_deg5.093
r_scangle_it2.103
r_scbond_it1.299
r_angle_refined_deg0.897
r_mcangle_it0.775
r_rigid_bond_restr0.533
r_mcbond_it0.408
r_chiral_restr0.068
r_bond_refined_d0.006
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2227
Nucleic Acid Atoms
Solvent Atoms414
Heterogen Atoms56

Software

Software
Software NamePurpose
SBC-Collectdata collection
SHELXDphasing
MLPHAREphasing
ARPmodel building
WARPmodel building
HKL-3000phasing
REFMACrefinement
HKL-3000data reduction
HKL-3000data scaling