☰ Navigation Tabs
Design and optimization of new piperidines as renin inhibitors
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 4.75 20-30% PEG 4000
0.6M KCl or NaCl, pH 4.75, VAPOR DIFFUSION, SITTING DROP
Crystal Properties Matthews coefficient Solvent content 2.45 49.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 66.666 α = 90 b = 93.405 β = 90 c = 118.271 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2006-08-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA 1.0 SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.17 59.1 87.5 0.08 7.8 39861 35174
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.17 2.3 37.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.17 59.1 35174 33347 1772 88.1 0.21713 0.2133 0.2127 0.29064 0.2807 RANDOM 46.256
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.39 5.45 -4.06
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.389 r_dihedral_angle_3_deg 17.999 r_dihedral_angle_4_deg 13.365 r_dihedral_angle_1_deg 7.61 r_mcangle_it 2.881 r_scangle_it 2.741 r_scbond_it 1.887 r_mcbond_it 1.854 r_angle_refined_deg 1.506 r_nbtor_refined 0.313
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.389 r_dihedral_angle_3_deg 17.999 r_dihedral_angle_4_deg 13.365 r_dihedral_angle_1_deg 7.61 r_mcangle_it 2.881 r_scangle_it 2.741 r_scbond_it 1.887 r_mcbond_it 1.854 r_angle_refined_deg 1.506 r_nbtor_refined 0.313 r_symmetry_vdw_refined 0.239 r_nbd_refined 0.221 r_xyhbond_nbd_refined 0.15 r_symmetry_hbond_refined 0.137 r_chiral_restr 0.104 r_bond_refined_d 0.012 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5161 Nucleic Acid Atoms Solvent Atoms 145 Heterogen Atoms 116
Software Software Software Name Purpose MAR345dtb data collection MOLREP phasing REFMAC refinement MOSFLM data reduction SCALA data scaling