3N27

Molecular Basis of the Inhibition of Henipa Viruses


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP5.6295tert-Butanol 35% (v/v), sodium citrate 0.1M, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 295.0K
Crystal Properties
Matthews coefficientSolvent content
2.2344.79

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 32.392α = 90
b = 54.055β = 90
c = 134.126γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMAR CCD 165 mm2007-09-19MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X4C0.97893NSLSX4C

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.867.192.50.05913.75.4208442084422
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.81.8675.30.4272.65.11645

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1WP81.867.12084420844107392.50.19630.19630.193830.24207RANDOM28.9
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.922.34-1.42
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.284
r_dihedral_angle_3_deg13.451
r_dihedral_angle_4_deg12.066
r_dihedral_angle_1_deg4.345
r_scangle_it3.285
r_scbond_it2.072
r_angle_refined_deg1.206
r_mcangle_it1.094
r_mcbond_it0.733
r_nbtor_refined0.292
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.284
r_dihedral_angle_3_deg13.451
r_dihedral_angle_4_deg12.066
r_dihedral_angle_1_deg4.345
r_scangle_it3.285
r_scbond_it2.072
r_angle_refined_deg1.206
r_mcangle_it1.094
r_mcbond_it0.733
r_nbtor_refined0.292
r_symmetry_hbond_refined0.202
r_nbd_refined0.196
r_xyhbond_nbd_refined0.164
r_symmetry_vdw_refined0.146
r_chiral_restr0.082
r_bond_refined_d0.011
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1738
Nucleic Acid Atoms
Solvent Atoms156
Heterogen Atoms23

Software

Software
Software NamePurpose
MAR345dtbdata collection
PHASERphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling