X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP7.4298PEG, pH 7.4, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.3848.45

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 58.541α = 75.3
b = 59.185β = 87.86
c = 95.603γ = 75.51
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMAR CCD 165 mm2007-06-09MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X06SA0.98010SLSX06SA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.892.4592.90.14.92.12957229572
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
2.82.9590.30.5461.22.1

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT2.855.442602926029139292.730.235740.227710.22520.27583RANDOM66.006
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
2.66-3.22-1.321.771.59-3.53
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.418
r_dihedral_angle_4_deg17.974
r_dihedral_angle_3_deg16.941
r_dihedral_angle_1_deg5.677
r_scangle_it4.992
r_scbond_it3.436
r_mcangle_it2.324
r_mcbond_it1.783
r_angle_refined_deg1.12
r_angle_other_deg0.76
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.418
r_dihedral_angle_4_deg17.974
r_dihedral_angle_3_deg16.941
r_dihedral_angle_1_deg5.677
r_scangle_it4.992
r_scbond_it3.436
r_mcangle_it2.324
r_mcbond_it1.783
r_angle_refined_deg1.12
r_angle_other_deg0.76
r_mcbond_other0.303
r_nbd_refined0.226
r_symmetry_vdw_other0.186
r_nbtor_refined0.183
r_symmetry_hbond_refined0.177
r_nbd_other0.162
r_xyhbond_nbd_refined0.151
r_symmetry_vdw_refined0.118
r_nbtor_other0.084
r_chiral_restr0.058
r_bond_refined_d0.009
r_gen_planes_refined0.003
r_bond_other_d0.001
r_gen_planes_other0.001
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms9207
Nucleic Acid Atoms
Solvent Atoms3
Heterogen Atoms81

Software

Software
Software NamePurpose
MOSFLMdata reduction
MOLREPphasing
REFMACrefinement
SCALAdata scaling