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Selective Benzothiophine Inhibitors of Factor IXa
Crystallization Crystal Properties Matthews coefficient Solvent content 2.05 40.08
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 43.12 α = 90 b = 65.738 β = 90 c = 93.985 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAR scanner 345 mm plate M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU 1.54179
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.62 94.07 5.1 8059 19.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.62 2.692 55.27 5.1 1101
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.62 94.07 7348 711 94.95 0.213 0.206 0.223 0.277 0.2906 RANDOM 20.926
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.51 -0.93 -0.58
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.451 r_dihedral_angle_3_deg 15.57 r_dihedral_angle_4_deg 12.212 r_dihedral_angle_1_deg 6.087 r_scangle_it 3.828 r_scbond_it 2.57 r_mcangle_it 2.002 r_mcbond_it 1.231 r_angle_refined_deg 1.101 r_angle_other_deg 0.724
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.451 r_dihedral_angle_3_deg 15.57 r_dihedral_angle_4_deg 12.212 r_dihedral_angle_1_deg 6.087 r_scangle_it 3.828 r_scbond_it 2.57 r_mcangle_it 2.002 r_mcbond_it 1.231 r_angle_refined_deg 1.101 r_angle_other_deg 0.724 r_symmetry_hbond_refined 0.242 r_mcbond_other 0.24 r_nbd_refined 0.189 r_symmetry_vdw_other 0.177 r_nbtor_refined 0.174 r_nbd_other 0.172 r_metal_ion_refined 0.171 r_xyhbond_nbd_refined 0.116 r_symmetry_vdw_refined 0.106 r_nbtor_other 0.079 r_chiral_restr 0.067 r_bond_refined_d 0.008 r_gen_planes_refined 0.003 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2251 Nucleic Acid Atoms Solvent Atoms 13 Heterogen Atoms 32
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction MOSFLM data reduction SCALA data scaling