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Crystal structure of abscisic acid receptor PYL2
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 8.2 298 Potassium phosphate dibasic, pH 8.2, VAPOR DIFFUSION, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.54 51.56
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 62.187 α = 90 b = 104.907 β = 90 c = 185.409 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2009-08-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-D 1.0 APS 21-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.85 30 92.6 0.085 11.4 52118 49719 2 2
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT 1.85 29.48 49719 3617 95.4 0.214 0.211 0.2174 0.25 0.2542 48.15
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.31 -0.41 0.73
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.523 r_dihedral_angle_4_deg 19.249 r_dihedral_angle_3_deg 16.593 r_sphericity_free 14.996 r_sphericity_bonded 10.512 r_scangle_it 6.241 r_dihedral_angle_1_deg 6.199 r_scbond_it 4.375 r_mcangle_it 3.514 r_rigid_bond_restr 3.172
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.523 r_dihedral_angle_4_deg 19.249 r_dihedral_angle_3_deg 16.593 r_sphericity_free 14.996 r_sphericity_bonded 10.512 r_scangle_it 6.241 r_dihedral_angle_1_deg 6.199 r_scbond_it 4.375 r_mcangle_it 3.514 r_rigid_bond_restr 3.172 r_mcbond_it 2.05 r_angle_refined_deg 1.68 r_angle_other_deg 0.972 r_mcbond_other 0.66 r_chiral_restr 0.109 r_bond_refined_d 0.018 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4169 Nucleic Acid Atoms Solvent Atoms 220 Heterogen Atoms 18
Software Software Software Name Purpose PHASER phasing REFMAC refinement PDB_EXTRACT data extraction DENZO data reduction SCALEPACK data scaling