X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP4.7529320-30% PEG 4000, 0.6M KCl, 0.1M NaCitrate buffer, pH 4.75, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.3246.88

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 66.028α = 90
b = 88.697β = 90
c = 118.307γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATEMAR scanner 345 mm plate2004-11-17MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X06SA1.0SLSX06SA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.531.888.80.0638.34.5985599855945

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.531.89355893558493088.240.200360.200360.19860.2329RANDOM27.296
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.110.97-1.07
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.361
r_dihedral_angle_4_deg16.418
r_dihedral_angle_3_deg14.239
r_dihedral_angle_1_deg6.772
r_scangle_it3.323
r_mcangle_it2.621
r_scbond_it2.216
r_mcbond_it1.652
r_angle_refined_deg1.377
r_nbtor_refined0.311
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.361
r_dihedral_angle_4_deg16.418
r_dihedral_angle_3_deg14.239
r_dihedral_angle_1_deg6.772
r_scangle_it3.323
r_mcangle_it2.621
r_scbond_it2.216
r_mcbond_it1.652
r_angle_refined_deg1.377
r_nbtor_refined0.311
r_nbd_refined0.211
r_symmetry_vdw_refined0.19
r_symmetry_hbond_refined0.181
r_xyhbond_nbd_refined0.143
r_chiral_restr0.091
r_bond_refined_d0.011
r_gen_planes_refined0.006
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms5252
Nucleic Acid Atoms
Solvent Atoms627
Heterogen Atoms111

Software

Software
Software NamePurpose
MAR345dtbdata collection
MOLREPphasing
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling