Find PDB structures and Computed Structure Models (CSM) by combining queries from tools in this suite: Attribute Search, Sequence Similarity, Sequence Motif, 3D Similarity, and 3D Motif with 'AND' logic.
microtubule doublet extracted from Tetrahymena cilia
Specimen Preparation
Sample Aggregation State
FILAMENT
Vitrification Instrument
FEI VITROBOT MARK II
Cryogen Name
ETHANE
Sample Vitrification Details
Blot for 3 seconds in humid air atmosphere before plunging into liquid ethane (FEI VITROBOT MARK II).
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
10700
Reported Resolution (Å)
23
Resolution Method
FSC 0.143 CUT-OFF
Other Details
gold standard
Refinement Type
HALF-MAPS REFINED INDEPENDENTLY
Symmetry Type
HELICAL
Map-Model Fitting and Refinement
Id
1 (3J6E)
Refinement Space
REAL
Refinement Protocol
RIGID BODY FIT
Refinement Target
Cross-correlation coefficient
Overall B Value
Fitting Procedure
Details
METHOD--kinesin binding, gradient density map analysis, and cross-correlation
coefficient. The fitting for protofilament A10 as represented by BIOMT ...
METHOD--kinesin binding, gradient density map analysis, and cross-correlation
coefficient. The fitting for protofilament A10 as represented by BIOMT records
51-55 is ambiguous as it has been assigned using only the cross-correlation
coefficient. REFINEMENT PROTOCOL--RIGID BODY DETAILS--rigid body fitting of
individual dimers