3J2S
Membrane-bound factor VIII light chain
ELECTRON MICROSCOPY
| Sample |
|---|
| Factor VIII light chain helically assembled onto lipid nanotubes |
| Sample Components |
| blood coagulation Factor VIII light chain |
| Specimen Preparation | |
|---|---|
| Sample Aggregation State | HELICAL ARRAY |
| Vitrification Instrument | FEI VITROBOT MARK III |
| Cryogen Name | ETHANE |
| Sample Vitrification Details | Blot for 3.5 seconds before plunging into liquid ethane (Vitrobot Mark III) |
| 3D Reconstruction | |
|---|---|
| Reconstruction Method | HELICAL |
| Number of Particles | |
| Reported Resolution (Å) | 15 |
| Resolution Method | |
| Other Details | IHRSR combined with SPIDER and EMAN2 |
| Refinement Type | |
| Symmetry Type | HELICAL |
| Axial Symmetry | C1 |
| Axial Rise | 8 |
| Angular Rotation | 10 |
| Data Acquisition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Detector Type | GATAN ULTRASCAN 4000 (4k x 4k) | ||||||||
| Electron Dose (electrons/Å**2) | 16 | ||||||||
| Imaging Experiment | 1 |
|---|---|
| Date of Experiment | 2010-04-02 |
| Temperature (Kelvin) | 95 |
| Microscope Model | JEOL 2010F |
| Minimum Defocus (nm) | -700 |
| Maximum Defocus (nm) | -4400 |
| Minimum Tilt Angle (degrees) | |
| Maximum Tilt Angle (degrees) | |
| Nominal CS | 2 |
| Imaging Mode | BRIGHT FIELD |
| Specimen Holder Model | GATAN LIQUID NITROGEN |
| Nominal Magnification | 52000 |
| Calibrated Magnification | 52000 |
| Source | FIELD EMISSION GUN |
| Acceleration Voltage (kV) | 200 |
| Imaging Details |
| EM Software | ||
|---|---|---|
| Task | Software Package | Version |
| MODEL FITTING | UCSF Chimera | |
| RECONSTRUCTION | EMAN | 2 |
| RECONSTRUCTION | IHRSR | |
| RECONSTRUCTION | SPIDER | |
| Image Processing | ||||
|---|---|---|---|---|
| CTF Correction Type | CTF Correction Details | Number of Particles Selected | Particle Selection Details | |
| phase corrected based on first Thon ring | ||||
