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Pyrazole-based Cathepsin S Inhibitors with Arylalkynes as P1 Binding Elements
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 4.56 pH 4.56
Crystal Properties Matthews coefficient Solvent content 2.16 43.12
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 113.264 α = 90 b = 37.192 β = 108.59 c = 105.863 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2008-02-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 24-ID-C APS 24-ID-C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.15 100.5 92.4 0.17 5.6 3 20453
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT 2.18 50 19371 1052 91.36 0.19129 0.18736 0.1917 0.26307 0.269 RANDOM 13.905
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.31 -0.91 -0.4 0.14
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.372 r_dihedral_angle_4_deg 20.189 r_dihedral_angle_3_deg 16.525 r_dihedral_angle_1_deg 6.204 r_scangle_it 2.543 r_scbond_it 1.755 r_angle_refined_deg 1.421 r_mcangle_it 1.174 r_angle_other_deg 0.91 r_mcbond_it 0.772
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.372 r_dihedral_angle_4_deg 20.189 r_dihedral_angle_3_deg 16.525 r_dihedral_angle_1_deg 6.204 r_scangle_it 2.543 r_scbond_it 1.755 r_angle_refined_deg 1.421 r_mcangle_it 1.174 r_angle_other_deg 0.91 r_mcbond_it 0.772 r_symmetry_vdw_other 0.216 r_symmetry_vdw_refined 0.199 r_nbd_other 0.192 r_nbd_refined 0.19 r_nbtor_refined 0.183 r_xyhbond_nbd_refined 0.167 r_nbtor_other 0.087 r_chiral_restr 0.079 r_symmetry_hbond_refined 0.057 r_bond_refined_d 0.014 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3420 Nucleic Acid Atoms Solvent Atoms 192 Heterogen Atoms 76
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling