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Trypanosoma cruzi farnesyl diphosphate synthase homodimer in complex with isopentenyl pyrophosphate and 3-Fluoro-1-(2-hydroxy-2,2-bis-phosphono-ethyl)-pyridinium
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.6 298 PEG 4000, 200mM Ammonium Sulfate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.29 46.37
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.976 α = 90 b = 57.976 β = 90 c = 389.756 γ = 120
Symmetry Space Group P 61 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2005-10-31 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X29A 1.1 NSLS X29A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 40 97 0.079 11.6 4 16079
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.4 2.49 87.7 0.239 2.2 1375
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 2.4 34.97 16008 809 97.24 0.178 0.175 0.243 0.2351 RANDOM 34.6
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.01 1 2.01 -3.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.686 r_dihedral_angle_4_deg 20.89 r_dihedral_angle_3_deg 18.629 r_dihedral_angle_1_deg 5.614 r_scangle_it 3.981 r_scbond_it 2.54 r_angle_refined_deg 1.735 r_mcangle_it 1.408 r_mcbond_it 0.867 r_metal_ion_refined 0.512
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.686 r_dihedral_angle_4_deg 20.89 r_dihedral_angle_3_deg 18.629 r_dihedral_angle_1_deg 5.614 r_scangle_it 3.981 r_scbond_it 2.54 r_angle_refined_deg 1.735 r_mcangle_it 1.408 r_mcbond_it 0.867 r_metal_ion_refined 0.512 r_nbtor_refined 0.312 r_symmetry_hbond_refined 0.27 r_symmetry_vdw_refined 0.262 r_nbd_refined 0.236 r_xyhbond_nbd_refined 0.231 r_chiral_restr 0.109 r_bond_refined_d 0.018 r_gen_planes_refined 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2891 Nucleic Acid Atoms Solvent Atoms 284 Heterogen Atoms 45
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction ADSC data collection HKL-2000 data reduction