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Crystal Structure of the huntingtin interacting protein 1 coiled coil domain
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 sitting drop vapor diffusion 6.5 298 50mM MES pH 6.5, 17.5% PEG 6000, sitting drop vapor diffusion, temperature 298K
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 35.801 α = 90 b = 57.092 β = 90 c = 81.161 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray CCD ADSC QUANTUM 315 SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 40.59 99.2 0.033 32.784 3.9 7765
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.38 96.8 0.176 3.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.3 40.59 7331 394 99.08 0.23709 0.23462 0.3206 0.28038 0.3312 RANDOM 50.344
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.03 -0.18 0.21
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.803 r_dihedral_angle_3_deg 21.259 r_dihedral_angle_4_deg 20.034 r_dihedral_angle_1_deg 7.433 r_scangle_it 2.772 r_mcangle_it 1.977 r_scbond_it 1.821 r_angle_refined_deg 1.361 r_mcbond_it 1.23 r_nbtor_refined 0.283
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.803 r_dihedral_angle_3_deg 21.259 r_dihedral_angle_4_deg 20.034 r_dihedral_angle_1_deg 7.433 r_scangle_it 2.772 r_mcangle_it 1.977 r_scbond_it 1.821 r_angle_refined_deg 1.361 r_mcbond_it 1.23 r_nbtor_refined 0.283 r_symmetry_hbond_refined 0.255 r_symmetry_vdw_refined 0.238 r_xyhbond_nbd_refined 0.217 r_nbd_refined 0.197 r_chiral_restr 0.108 r_bond_refined_d 0.01 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1281 Nucleic Acid Atoms Solvent Atoms 65 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling PHASER phasing REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data reduction HKL-2000 data scaling