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Hepatitis C virus polymerase NS5B with saccharin inhibitor 1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 4.9 293 50 mM Na Citrate pH 4.9, 24% PEG 3350, 7.5% glycerol, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.22 44.64
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 86.019 α = 90 b = 105.664 β = 90 c = 125.509 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2005-01-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.2 1.000 ALS 5.0.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.95 50 83.2 0.118 9.65 4.1 83888 69603 19.9
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.95 2.02 44.6 0.581 1.16 2.3 3660
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 1.95 48.68 66053 3476 83.02 0.20914 0.20644 0.204 0.25935 0.2541 RANDOM 20.756
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.26 0.62 -0.88
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.028 r_dihedral_angle_4_deg 15.22 r_dihedral_angle_3_deg 14.64 r_dihedral_angle_1_deg 5.918 r_scangle_it 2.759 r_scbond_it 1.754 r_angle_refined_deg 1.333 r_mcangle_it 1.204 r_angle_other_deg 0.897 r_mcbond_it 0.714
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.028 r_dihedral_angle_4_deg 15.22 r_dihedral_angle_3_deg 14.64 r_dihedral_angle_1_deg 5.918 r_scangle_it 2.759 r_scbond_it 1.754 r_angle_refined_deg 1.333 r_mcangle_it 1.204 r_angle_other_deg 0.897 r_mcbond_it 0.714 r_symmetry_vdw_other 0.248 r_nbd_refined 0.213 r_symmetry_hbond_refined 0.201 r_symmetry_vdw_refined 0.198 r_nbd_other 0.193 r_nbtor_refined 0.181 r_xyhbond_nbd_refined 0.15 r_mcbond_other 0.139 r_nbtor_other 0.086 r_chiral_restr 0.075 r_bond_refined_d 0.012 r_gen_planes_refined 0.005 r_gen_planes_other 0.002 r_bond_other_d 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8775 Nucleic Acid Atoms Solvent Atoms 536 Heterogen Atoms 72
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling